Browsing by Author "Sunar, K."

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    Searching for phosphate solubilizinz tungal isolates from soil
    (University of North Bengal, 2008-03) Chakraborty, B. N.; Chakraborty, U.; Saha, A.; Dey, P. L.; Sunar, K.
    A total of 354 fungal isolates were obtained from soil samples collected from forests, river basins and agricultural fields of North Bengal using serial dilution, direct soil plating, serial root washing and root maceration techniques. Cultural characteristics of the isolated fungi were studied and microscopic observations were made for identification of these isolates. All the isolates were screened for their phosphate solubilizing activities in vitro. A total of 70 fungal isolates showed phosphate solubilizing activities as detected in Pikovskaya's agar medium. Quantitative evaluation of phosphate solubilization in liquid medium supplemented with two phosphate sources (tricalcium phosphate and rock phosphate) was carried out for all the isolates showing phosphate solubilizing activity. Maximum phosphate solubilizing capacity was shown by three isolates of A. niger while A. clavatus showed minimum activity. Genomic DNA was extracted from sixteen isolates showing high activity and PCR amplification of DNA from nine isolates was done.
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    Serological and molecular detection of Macrophomina phaseolina, causing root rot of Citrus reticulata
    (University of North Bengal, 2012-03) Chakraborty, B.N.; Chakraborty, U.; Rai, K.; Sunar, K.; Dey, P.L.
    Polyclonal antibodies (PAbs) were raised against mycelial antigens of Macrophomina phaseolina a causal organism of root rot disease of mandarin plants. IgG was purified and further packaged into immunological formats such as immuno diffusion, Plate trapped antigen (PTA)-ELISA, dot immunobinding assay, Western blot analysis and indirect immunofluorescence for quick and accurate detection of pathogen from soil. Indirect staining of mycelia and sclerotia of M. phaseolina with homologous PAb and labeling with goat antirabbit IgG conjugated with FITC developed strong fluorescence in young hyphal tips and sclerotia of M. phaseolina. Genomic DNA prepared from mycelia of M. phaseolina was purified and PCR amplification of 18S rDNA was done using ITS region specific primer pair. The amplified DNA was sequenced and aligned against ex-type strain sequences from NCBI GenBank using BLAST and phylogenetic analysis was obtained using MEGA4 software. Amplification of ITSI region of the rDNA can be considered as a rapid technique for identifying pathogens successfully in all cases.